The site survey for the Advanced Technology Solar Telescope concluded recently after more than 2 years of data gathering and analysis. Six locations, including lake, island, and continental sites, were thoroughly probed for image quality and sky brightness. The present paper describes the analysis methodology employed to determine the height stratification of the atmospheric turbulence. This information is crucial, because daytime seeing is often very different between the actual telescope aperture (~30 m) and the ground. Two independent inversion codes have been developed to simultaneously analyze data from a scintillometer array and a solar differential image monitor. We show here the results of applying them to a sample subset of data from 2003 May that was used for testing. Both codes retrieve a similar seeing stratification through the height range of interest. A quantitative comparison between our analysis procedure and actual in situ measurements confirms the validity of the inversions. The sample data presented in this paper reveal a qualitatively different behavior for the lake sites (dominated by high-altitude seeing) and the rest (dominated by near-ground turbulence).