Numerical Simulation of Astrophysical Processes

Start year
2003
Organizational Unit

Grants related:

    General
    Description

    Numerical simulation through complex computer codes has been a fundamental tool in physics and technology research for decades. The rapid growth of computing capabilities, coupled with significant advances in numerical mathematics, has made this branch of research accessible to medium-sized research centers, bridging the gap between theoretical and experimental physics. Astrophysics is no exception to this trend. Since the late 1970s, a specialized field known as computational astrophysics has emerged, allowing us to understand a wide range of phenomena that were previously inaccessible to pure theoretical research and to account for previously unexplained observations.

    In recent decades, its primary areas of application have included (magneto)hydrodynamic phenomena and gas dynamics in various cosmic environments. For example, this includes the interiors and atmospheres of stars and planets, the interstellar medium, including magnetohydrodynamics and dynamos, accretion disks, the evolution of planetary nebulae, supernova explosions and remnants, and more. The incorporation of radiative transport equations into numerical simulations, which occurred in past decades, has added greater realism to the study of hydrodynamic processes in stellar photospheres and chromospheres.

    The current project aims to support the development of astrophysical research at the IAC based on the use of large numerical codes that require massively parallel computers and their connection with observational results. The general objective of this project is to perform calculations related to cosmic fluid dynamics and radiative transport. The topics of these calculations will focus on:

    1. Magnetized gas dynamics in the interiors and atmospheres of stars.
    2. Radiation transport and polarization signals in spectral lines based on realistic atomic and molecular models, including Hanle and Zeeman effects.
    3. Comparing theoretical/numerical results with observational data.

    This project is particularly relevant given the increasing involvement of the IAC in national and European supercomputing networks and, more generally, in large-scale supercomputer installation initiatives.

    Principal investigator

    In the following, we highlight the results of our annual year-end summary.

    Throughout the year 2022, partial ionization effects, nonequilibrium ionization effects, and multi-fluids have been one the main blocks of development both from the theoretical and numerical perspective. For instance, a generalization of the the Braginskii 1965 equations has been achieved for a general multi-species plasmas with arbitrary masses and temperatures, and where all of the viscosities and heat fluxes in the model are described by their own evolution equations. This new approach has a crucial advantage that the parallel components along the magnetic field lines do not become unbounded (infinitely large) in regimes of low-collisionallity of interest for this group as, for example, the solar corona (Hunana et al. 2022).  In this thematic block, 2D and 3D simulations, using a two-fluid model that treats the neutral and ionized species as two separate components, have also been performed to analyze the effect that the collisional interaction between both components has on the dynamics of coronal rain, the evolution of the instability of Kelvin-Helmholtz, the propagation of magneto-acoustic waves through the solar chromosphere or the heating of the plasma (Martínez-Gómez et al. 2022a). Another example of the theoretical development with potential numerical applications has been the pursuit of the effects of the ambipolar diffusion in the chromosphere from a more fundamental perspective by means of analytical solutions. The obtained solutions for cases with cylindrical symmetry are shown to constitute a demanding, but nonetheless viable, test for magnetohydrodynamic (MHD) codes that incorporate ambipolar diffusion. In addition, detailed tabulated runs of the solutions have been made available public for the community (Moreno-Insertis et al. 2022).  Lastly, nonequilibrium ionization effects of the Hydrogen atom together with the study of the Lyman α effects have been started to study in simple configurations to be applied later in realistic simulations that include the chromosphere.

     

    Improving and testing the capabilities of the available MHD codes in the solar group has been another of the major key developments carried out in 2022. For example, the results obtained by Moreno-Insertis et al. 2022 were used to check that the MHD Bifrost code is able to reproduce the theoretical solutions with sufficient accuracy up to very advanced diffusive times, as well as to explore the asymptotic properties of these theoretical solutions. In addition to that, several changes have been performed in the MANCHA code whose aim was to increase the efficiency and to add new features that will allow the researchers to perform more realistic experiments as well as exploring new research areas. For instance, MANCHA code has been extended to be able to simulate solar simulations up to the corona, adding a new module that efficiently calculates one of the key ingredients in the corona: the thermal conduction (Navarro et al. 2022). The preparation of the MANCHA code for its multi-fluid extension with radiation has also been another working branch concerning the numerical development in 2022. In addition, new equation-of-state and opacity routines have been developed that allow separating the equilibrium background contributions from those treated out of the equilibrium. Besides facing different challenges in solar physics, the huge development brought about in MANCHA is useful to study main sequence cool stars (G,K,M), which contributes to the better understanding of the stellar physics. To accomplish all these tasks, it was necessary not only to carry out numerous scaling tests and numerical experiments in local machines at the IAC, as well as on Supercomputers such as LaPalma, PICASSO, PizDaint, and MareNostrum4; but also to work together with external collaborators.

     

    During 2022, in this project there has also been a focus on different solar atmosphere phenomena and the corresponding comparison with observations. As an illustrative example, Coronal Bright Points (CBPs) have been modeled for the first time with enough realism to unravel the mechanisms that generate them and provide them with energy, being also able to explain different characteristics observed from space satellites. The comparison with observations is through synthetic SDO/AIA, Solar Orbiter EUI-HRI, and IRIS images that have been computed from the numerical experiment performed with the Bifrost code (Nóbrega-Siverio and Moreno-Insertis, 2022). Another example is the combination of 3D numerical experiments with the MoLMH code and forward modelling using Hα line to study transverse kink oscillations in prominence threads. The results contain relevant implications for the field of prominence seismology, showing that the Hα emission can be used to detect the fundamental mode of the oscillations (Martínez-Gómez et al. 2022b). In addition, ground high-resolution observations of ejective phenomena such as surges in the solar atmosphere have been analyzed, finding striking similarities with results obtained from numerical experiments. On top of that, there have also been significant contributions from the members of this project to the further advance of the observations and construction of new telescopes (Quintero et al. 2022) and satellites (De Pontieu et al. 2022, Cheung et al. 2022), using the earned knowledge from the theoretical-numerical experiments. Finally, an exploratory first attempt at understanding the physics of coronal holes and active regions from a global point of view through 2D magnetohydrostatic solutions was performed (Terradas et al. 2022), which will need of further development in the incoming years for comparisons with observations.

     

    Last but not least, state-of-the-art tools such as the ones provided by Machine Learning and Bayesian statistics have been applied to solar atmosphere problems. In this vein, a project to characterize the limits of the k-means methods and its application to solar observations was launched. In addition, new development in radiative transfer codes have being started to use in a preliminary study of machine learning approach to the computations of radiative terms. Development of the application of Bayesian techniques to the comparison of models in seismology of the solar atmosphere continued in 2022, with a review article published that accounts for the main results obtained in the last decade (Arregui 2022a). Moreover, the Bayesian formalism has been successfully applied to the prediction of the amplitude of the solar activity cycle, proposing a new methodology to quantify the goodness of both the prediction and the underlying model (Arregui 2022b).

    Related publications

    • Thermodynamic fluctuations in solar photospheric three-dimensional convection simulations and observations
      Context. Numerical three-dimensional (3D) radiative (magneto-)hydrodynamical [(M)HD] simulations of solar convection are nowadays used to understand the physical properties of the solar photosphere and convective envelope, and, in particular, to determine the Sun's photospheric chemical abundances. To validate this approach, it is important to
      Beck, C. et al.

      Advertised on:

      9
      2013
      Citations
      18
    • Physical properties of a sunspot chromosphere with umbral flashes
      We present new high-resolution spectro-polarimetric Ca IIλ8542 observations of umbral flashes in sunspots. At nearly 0.18 arcsec, and spanning about one hour of continuous observation, this is the most detailed dataset published thus far. Our study involves both LTE and non-LTE inversions (but includes also a weak field analysis as a sanity check)
      de la Cruz Rodríguez, J. et al.

      Advertised on:

      8
      2013
      Citations
      103
    • Improved Search of Principal Component Analysis Databases for Spectro-polarimetric Inversion
      We describe a simple technique for the acceleration of spectro-polarimetric inversions based on principal component analysis (PCA) of Stokes profiles. This technique involves the indexing of the database models based on the sign of the projections (PCA coefficients) of the first few relevant orders of principal components of the four Stokes
      Casini, R. et al.

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      8
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    • Target Selection for the Apache Point Observatory Galactic Evolution Experiment (APOGEE)
      The Apache Point Observatory Galactic Evolution Experiment (APOGEE) is a high-resolution infrared spectroscopic survey spanning all Galactic environments (i.e., bulge, disk, and halo), with the principal goal of constraining dynamical and chemical evolution models of the Milky Way. APOGEE takes advantage of the reduced effects of extinction at
      Zasowski, G. et al.

      Advertised on:

      10
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      335
    • Plasma Jets and Eruptions in Solar Coronal Holes: A Three-dimensional Flux Emergence Experiment
      A three-dimensional (3D) numerical experiment of the launching of a hot and fast coronal jet followed by several violent eruptions is analyzed in detail. These events are initiated through the emergence of a magnetic flux rope from the solar interior into a coronal hole. We explore the evolution of the emerging magnetically dominated plasma dome
      Moreno-Insertis, F. et al.

      Advertised on:

      7
      2013
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      142
    • Atmosphere Dynamics of the Active Region NOAA 11024
      We present results of the study of chromospheric and photospheric line-of-sight velocity fields in the young active region NOAA 11024. Multi-layer, multi-wavelength observational data were used for the analysis of the emerging flux in this active region. Spectropolarimetric observations were carried out with the telescope THEMIS on Tenerife (Canary
      Khomenko, E. V. et al.

      Advertised on:

      6
      2013
      Citations
      16
    • Is Magnetic Reconnection the Cause of Supersonic Upflows in Granular Cells?
      In a previous work, we reported on the discovery of supersonic magnetic upflows on granular cells in data from the SUNRISE/IMaX instrument. In the present work, we investigate the physical origin of these events employing data from the same instrument but with higher spectral sampling. By means of the inversion of Stokes profiles we are able to
      Borrero, J. M. et al.

      Advertised on:

      5
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    • Bayesian Analysis of Multiple Harmonic Oscillations in the Solar Corona
      The detection of multiple mode harmonic kink oscillations in coronal loops enables us to obtain information on coronal density stratification and magnetic field expansion using seismology inversion techniques. The inference is based on the measurement of the period ratio between the fundamental mode and the first overtone and theoretical results
      Díaz, A. J. et al.

      Advertised on:

      3
      2013
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      20
    • Constraining clumpy dusty torus models using optimized filter sets
      Recent success in explaining several properties of the dusty torus around the central engine of active galactic nuclei has been gathered with the assumption of clumpiness. The properties of such clumpy dusty tori can be inferred by analysing spectral energy distributions (SEDs), sometimes with scarce sampling given that large aperture telescopes
      Ramos-Almeida, C. et al.

      Advertised on:

      1
      2013
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      11
    • Solar Fe abundance and magnetic fields. Towards a consistent reference metallicity
      Aims: We investigate the impact on Fe abundance determination of including magnetic flux in series of 3D radiation-magnetohydrodynamics (MHD) simulations of solar convection, which we used to synthesize spectral intensity profiles corresponding to disc centre. Methods: A differential approach is used to quantify the changes in theoretical
      Fabbian, D. et al.

      Advertised on:

      12
      2012
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      43
    • Analytic Approximate Seismology of Propagating Magnetohydrodynamic Waves in the Solar Corona
      Observations show that propagating magnetohydrodynamic (MHD) waves are ubiquitous in the solar atmosphere. The technique of MHD seismology uses the wave observations combined with MHD wave theory to indirectly infer physical parameters of the solar atmospheric plasma and magnetic field. Here, we present an analytical seismological inversion scheme
      Goossens, M. et al.

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      12
      2012
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    • Shear Photospheric Forcing and the Origin of Turbulence in Coronal Loops
      We present a series of numerical simulations aimed at understanding the nature and origin of turbulence in coronal loops in the framework of the Parker model for coronal heating. A coronal loop is studied via reduced magnetohydrodynamic (MHD) simulations in Cartesian geometry. A uniform and strong magnetic field threads the volume between the two
      Rappazzo, A. F. et al.

      Advertised on:

      10
      2010
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      50
    • Simulation of a flux emergence event and comparison with observations by Hinode
      Aims: We study the observational signature of flux emergence in the photosphere using synthetic data from a 3D MHD simulation of the emergence of a twisted flux tube. Methods: Several stages in the emergence process are considered. At every stage we compute synthetic Stokes spectra of the two iron lines Fe I 6301.5 Å and Fe I 6302.5 Å and degrade
      Yelles Chaouche, L. et al.

      Advertised on:

      12
      2009
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    • Nonlinear force-free modelling: influence of inaccuracies in the measured magnetic vector
      Context. Solar magnetic fields are regularly extrapolated into the corona starting from photospheric magnetic measurements that can be affected by significant uncertainty. Aims: We study how inaccuracies introduced into the maps of the photospheric magnetic vector by the inversion of ideal and noisy Stokes parameters influence the extrapolation of
      Wiegelmann, T. et al.

      Advertised on:

      2
      2010
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    • Comparison of the thin flux tube approximation with 3D MHD simulations
      Context: The structure and dynamics of small vertical photospheric magnetic flux concentrations has been often treated in the framework of an approximation based upon a low-order truncation of the Taylor expansions of all quantities in the horizontal direction, together with the assumption of instantaneous total pressure balance at the boundary to
      Yelles Chaouche, L. et al.

      Advertised on:

      9
      2009
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    • The emergence of toroidal flux tubes from beneath the solar photosphere
      Context: Models of flux emergence frequently use a twisted cylindrical loop as the initial starting configuration and ignore the coupling between the radiation field and plasma. In these models, the axis of the original tube never emerges through the photosphere. Without the axis emerging, it is very difficult to form a realistic sunspot. Aims: The
      Hood, A. W. et al.

      Advertised on:

      9
      2009
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    • On the Origin of the Type II Spicules: Dynamic Three-dimensional MHD Simulations
      Recent high temporal and spatial resolution observations of the chromosphere have forced the definition of a new type of spicule, "type II's," that are characterized by rising rapidly, having short lives, and by fading away at the end of their lifetimes. Here, we report on features found in realistic three-dimensional simulations of the outer solar
      Martínez-Sykora, Juan et al.

      Advertised on:

      7
      2011
      Citations
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    • Magnetic flux emergence into the solar photosphere and chromosphere
      Aims: We model the emergence of magnetized plasma across granular convection cells and the low atmosphere, including layers up to the mid-chromosphere. Methods: Three-dimensional numerical experiments are carried out in which the equations of MHD and radiative transfer are solved self-consistently. We use the MURaM code, which assumes local
      Tortosa-Andreu, A. et al.

      Advertised on:

      11
      2009
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      69
    • Jets in Coronal Holes: Hinode Observations and Three-dimensional Computer Modeling
      Recent observations of coronal hole areas with the XRT and EIS instruments on board the Hinode satellite have shown with unprecedented detail the launching of fast, hot jets away from the solar surface. In some cases these events coincide with episodes of flux emergence from beneath the photosphere. In this Letter we show results of a three
      Moreno-Insertis, F. et al.

      Advertised on:

      2
      2008
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      206
    • The Three-dimensional Structure of an Active Region Filament as Extrapolated from Photospheric and Chromospheric Observations
      The three-dimensional structure of an active region filament is studied using nonlinear force-free field extrapolations based on simultaneous observations at a photospheric and a chromospheric height. To that end, we used the Si I 10827 Å line and the He I 10830 Å triplet obtained with the Tenerife Infrared Polarimeter at the Vacuum Tower Telescope
      Yelles-Chaouche, L. et al.

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      3
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